io.github.rachadele

biolit

LLM-assisted biomedical literature screening and extraction for PubMed, GEO, and preprints.

stdiocommunityknowledge

Package Details

biolit

0.1.25•https://pypi.org/project/biolit
Transportstdio

Environment Variables

ANTHROPIC_API_KEY(str)
Secret

Anthropic API key (required when using the default Anthropic provider)

OPENAI_API_KEY(str)
Secret

OpenAI API key (required when using LLM_PROVIDER=openai)

LLM_PROVIDER(str)

LLM provider: anthropic (default), openai, or ollama

LLM_MODEL(str)

Model name override (e.g. claude-sonnet-4-6, gpt-4o)

SEMANTIC_SCHOLAR_API_KEY(str)
Secret

Semantic Scholar API key for higher rate limits on citation lookup (optional)

UNPAYWALL_EMAIL(str)

Email address for Unpaywall API access to improve PDF retrieval (optional)